NONCODE TRANSCRIPT ID NONHSAT259936.1 NONCODE Gene ID NONHSAG055050.3 Chromosome chrX Start Site 103913348 End Site 103919539 Strand - Exon Number 5 CNCI Score -0.2998140 Length 894 Assembly hg38 Other transcript Versions None
Sequence
>NONHSAT259936.1 TTTACATTTTTTAAAAAAATTTCTTGGTTTATTCATATAAATCATGTTTATAGATTTTCTAATATTAAATCATACTAGCTTTCTGGGAAAGAAATTCCTTCCTGTGGGTGGCTTCCCTGGATATTAATTAGGTTCCTTCCTATGCCTCATCATGATGAAATTCTTGACCGTGCACAATCACCCAGTGGTTAAGCTCGGGTTTCTCATGACTTTCACACCCTTGGCCACTTGCTTCCTTCAAAAGCCCCAAGGCCCCGCTGTGTCCTGGGGGACTTCAGGTTCGCAGAAGCAGCCTGGATCCTAGGCTCAGCTGGGCTCCCTCTGCAGCAAGAACCTGGGCTGTGGTGTGGGACAAAACAGGGGCTAGGGAAGTGCGTTGGACCCCTTGAAGAGCCTTTCCTTCACCTGTTTTTGTCTGAGTCTCCAGCTCTCCACACCGCTCACATTTCAGGCACAGTTGTGCTGAGAGAGCAGGCTGTACTCAACCCTGCCCACCCTCAGCTATGGCAAGCTATGCATTCCAGGAATTCTTCTACACCTAGAAGATAaaaccacatgtttgtcccgctaacttttctaaggttttagattctcagctatctacacacaatggccaaagagcctcatgtgctcgtgctcccgtcgcagatggaagacaggaaatcaaaagatatccaaggaagggaaaagggtcaataagaaattggtactctccaaaagtcacacaaacattaaaccatgaagggatggtttcctgatcaggaatgcaacccatgatgtcgaggtgaaagcgcagaatTTGAACTCAAaggctgcaaggtgaagtggcctttgtttttattcccacaggggcagtttgagcagacacaagagtttaactttctttaggtcagattttttgctctttacttttatcaagaagagttttaaggctagctgtcacaccattatgtgtctttttatacatttaacctttctatcaatcagttagtataagaactctctaaaatccttttaataaaattgaggaggctaatttaagggatcgatcttttggccattgacaattataattcttaatagtgtactgaatttcaatagtgactggatgcaataggcttttcagagaaCAAGTAATCCCAAAGATTCCCCCTGTTCCCAGACATAGGCTAAAAGTAACAAATGActcctgggattgctgtttaccagcactcgctagctagaccagcggtccccaacctttctggcattttcttggaagacaatttttccatggactggcattgaggggatggtattgggatgattcaagggcattacattaattgcacactttatttctattattattacattgtaatatatattgaaatacttatacaactaaccataatgtggaatcagtgggagccctgagcttgttttcttccaactagacggtcccatctaagagtgataggagaggatgacatattatcaggcaatagattcccataaggagtgtgcaactgaagatccctcacatgtacagttcaccaaagggttctcgttcctatgaaactctaatgctgctgacctgacaggaggcagagctcaggcggtaatgccagtagtggtgagtggatgtaaatatagatgaaacttctgctgctcgctgatgctcacctgctgctgaaacggcccggttcctaacaggccacggacctgtatcaatacctggattatgggttggtgatccttgctcgagacaataaagtttgagatgacaaaagccccttatggatgagacttcttatgacaaatcctgccgagagctaggcacattcagaacaaaataaaatctctccgcttcccagcgaagagatttgttagaccagacacctgctttgacccaaaaatcacttcccctggatggtggcaagcaagagagagtgcttcctcttgctcacaaatcaagctctcaagaacacagatcaagacaagagggaactttatcctgtaaccctctctatgaacaacacagaaagacaaagtcaaaggaatacactgtttctggcatgaaagggataaaaaatgtgaatattcataccacaaagtagtgtaaggtgtaccagagttgctacacctagaccagtcacacaacaatctttttctcctaggcatgaaaccttgtagaggagacaaacagagggatttgttttgtaccatctgcccaactgggttgtacagagagagaagctgggggcctgactggtaagaaattcttgcccttttgccaccttgtcagatgactgcattcccttaacttcaggttccagaagagtggagtggctttggtgacccttcttgctataccaaaTTGTGtgaaggtttgctaagaaatcaactcacaaaaggcagattaacaagagaaaaagcatacaaggccgggcgcagtggctcacacctgtaatcccagcactatgggaggctgaggcaggcggatcacgaggttaggagatcgagaccatcctggctaacacggtgaaaccccgtctccactaaaaatacaaaaaattagcccggcgtggtggcgggcgcctgtagtcccagctacttgggaggctgaggcaggagaatggtgtgaacctgggagggggaggttgcagtgagcagagattgcaccactccagcctgggtgacagagcgagactccgtctcaaaaaaaaaaaaagcatacaaatttatttaacatatatacactgcagccttcggagcaaaggcagaaaggtacagggtaaattgtctatttatatgctcaggttcaacaaagtatggacagccctgtagaaatatgatgggacaaaaaggctaagacctaatgctaatccagcagggcttgtttgtctagactgtgcttggcttctgtgaacacagatttcttcctcctgggtatggggcaggaccctctctgtaatggggtcttgtgacctgcagtcaaacaaggtcagatcatttctttatgaccagttttacacaaaaaaggtggaggaaaaattagaaaagtatttttaggctttgtgactatctttagaaaaaaaggcttctggtttctaggacccaccttggggaagagggattctggtctgtacagttagctccctgggaagaatggggctgacagacaggaggacccaggacctcagagaacatcttttacatccgagactacttctggggcctttattttggggtatcatgctctgagccccaacaATAGAAGtcagctgcatgtgcaagttcatcacttacaatttttactttcctcaaaaacactaagaaaacaatacagaccaaacctttgccactgtaaaactaggattgcctttcctcaagcttccagtaacatcttcctagtttcggtctcataactcaccacaagcacctttaacactcatagctctagcaacatatcggtgatcatgatatatgtattctctaagtcagagatcctttgtctgcagcaaataattcttttcttaaccctcacttgaattgcatttggtgtccatatttcccccagccatctcctaaaggccctctaggcttcttgtgccatgcatgtcaaaatgcttccagtctctatccattatctagttccaaagctgcttccactctttcaggtgttagctaTCAGATCTGTCTGGCAACAGAATCCCtattggtttgctctgttagcctgacaatgtaccacagacctgggtggcctaaacagcagacattaattgttcacagttctggaggttggaagtccaaatcaaagcgtcagctgggttgtttccttctgagtaataagagggaaggatctcttccagggatttttcctcagcttgtagatggcccacttctctgtatgctacttcacattttcttccctgtacacatgtctctttgtctgaatttccccttttgataggcacaatgcacgctagccatttcgagttagagcccaccctaatgaatgtaatttaacttcagtatcccactaaaaaacccatcttcaagtaggagagagacgaggggtcaggagtccaatagatgtatttggtgtttttttttggggggggggacacaactgaacccataGGACATAGGAATCCTGAGTTGTAGGTGGGAATACCTCCTGCCTCTTCCATTATGTTAAGAGAACACTGGTAACTGATGAAGGGAAAGAAGGTGACTCCTACCCATCTTTTTTCAAGACTACTTGAATGTTGAGTAATTTTATacacacacacacgcacacacacacacaTTtatatatatatatatatatatatatatatatatatataAAATCTGGTTTATTCCATTAAATTCTCTAGGTATAATGAGAGTGAAAAAGCTAAGGAACATTGTTAGAGATATAATGTTGATCTGACTAATCCTTATAAAGGGAAACCTAGGAATATAAGAGACAGAAATGACCATGTAGTAAAGGGATTAAATGGAAAATTATTAAATGAAAATTATTACTGTCCTTGAAGCAAGTTGCGCTATAGATATATTAGAGTTGACAATGTTTAGTTCTCGGAAAAAGAATGCATGAAAAATCTTCAGGACGCCACAGGCCACCTGCCCCTCCCCTTTACTACCTCCCCCCGCAAGAGGTAATAAGAACCCATTAATCTCATGACCTCAGGTCTCAATCACACACCCCTTTGTCAAAGTTTACCCCCGTTATTTCTCAGATTCTTACATGAGCTCGGAAACTAGCGTTCCCCTGTATTTTACTTGCAGCCTCTCAACAGGTGCCTGCCTTGAGAAAATTAGCCTCTGGGGTAGAGTCGACTTTTGTCCACTGGGGGTCGCAGATCCCAGTCCTCAGGGCCTCAAGACTGTGCCGCGAAGGAAGGAAAGGAAGGGTTGGGAGCAGCCTCTTCTGAAAACCTGATACCTCCCCTCCACCGCCTCCTCTGTCGCCAGGCGGAAAATTCCCTCTCCCATCTTCTGAACACAAGCCAAAGTGCCTCCTGCACTCCCGCCCCCCGTACATTTCCTGCGGGAAACCGTCGGCCTACCAGCTCTGCAATCAGCCGCACAGAATTCAAATTCGGATTCGGCTTTGATGACCTGCCGGAGAGAAAGGGACTAGAAGTTGGATGACCTCCCACCCCCATATTCCTTCCCAGGAAGAGATGAGGAGATGCAAAAGGGGTTCAAGACAGCTTGCGATCGTCTTCTCCCGCCCCTTGCCACCTCCCCGAACACCCGCCCCCGACGCCCGACAACACCCCCGCCCACTTCAATCCAGGCAAATCATAAATCCTACCCAGTCGGCAGCATCCAGATGAGCCACAACTCCTTTCTCAGCGCAACCAGGCCATGGGAGTGCTCCATCCCCTGCCTCGCAGTTACTGATTCTCCAAGCCGGGCGCCGCCCAGTCCTGGTGGGGCTTCCCCCACCCCTCTCCGCGCCGGGAAATCGCGCGCTCTTTCTTTACCTGCGCTCCACTGGTGGGCAGCGTATGCTCCCGCGTCGACAGCTCTGTTTCGCCTTCCGGTCCCCATAGCTCTGCAGGGGAACAGGATCGCTGGCGCCTCCTGGGCCGCTAAGCGACCCCGGGGCTGCCCGGCTTAGCGAGTGCTTCGCAGAGAGGTAGCCGAGTCGAGGCAGCGCGGTTCCCAAGGAAGTCACGGCTGCGGCCACCCTCCAGTTCGGACCTCCGGGCAGCCGCGGTTGCTTTCAGTCTCTGCCCATTGAGACAAAAGAGCGTGACAAGCCGCGCGACGCGGCCAATCAGCGGGGCGAGGAGGCGGCCTACCCAAGCAGCCTCTGGCCCTGAAGCTACTGCTAGCAAGACTCGGGAGCTGGCTGGCGGGGGCTGAGGCCGACAGGCACGGGAGCCGGCGCGGCGTCAAGTGGAGCTCGGACGCACGGACCAGGCCCATTTCCCTTTCATCTGTGAGTTTGCTGctaccccgtcgcttcccttctccccatccccttccgcctCGGCTCTGCTCCGGGCTTTGAGACCGGATGCCTGAAACACGAGGTGGGACAGAAACCAAGTGAACAATGAGAGTTCCTTACCTTTGTATAGGGGGAAGGGGGGAAACAGcatttactgagtgctttctgtgtgcggatgcgcctgtctcctttcttctcagcagccctgtgaaggaggtagcagtgtgcccactta
Expression Profile(Data Source:Human Body Map ) adipose adrenal brain brain_R breast colon 0 0.00871445 0 0 0 0 foreskin heart heart_R HLF_1 HLF_2 kidney 0 0 0 0 0 0 liver liver_R lung lymphNode ovary placenta_R 0 0 0 0 0 0 prostate skeltalMuscle testes testes_R thyroid whiteBloodCell 0 0 0 7.55076e-08 0 0
Expression profile of NONHSAT259936 in Human tissues
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Exosome Expression Profile(Data Source: NCBI GEO ) Structure Visualization No structure predicted!
DataSource: show detail information
See experimental data visualization in DMS dataset or PARS dataset
The following is the detail information of RNA secondary structure predicttion.
We use software RME We select two datasets respectively from PARS and DMS-seq to predict. However, it only predicted minority RNA secondary structures through dataset correction with the limitation of sequencing data coverage. So many transcripts only have RNA secondary structure information predicted without experimental data. If the transcript do have sequencing data covered, you can switch "DataSource" to see the RNA secondary structure predicted based on different datasets.
We use forna If you want more detail infomation of RNA secondary structure of this transcript, please visit website http://RNAex.ncrnalab.org/
Isoforms
