Detail infomation of NONHSAT000013.2--NONCODE

Detail infomation of NONHSAT000013.2

General info
View in Genome Browser

NONCODE TRANSCRIPT ID	NONHSAT000013.2
NONCODE Gene ID	NONHSAG000004.2
Chromosome	chr1
Start Site	34553
End Site	36081
Strand	-
Exon Number	3
CNCI Score	-0.0040960
Length	1187
Assembly	hg38
Other transcript Versions	NONHSAT000013.1(old version)

Sequence

>NONHSAT000013.2

CACACAACGGGGTTTCGGGGCTGTGGACCCTGTGCCAGGAAAGGAAGGGCGCAGCTCCTGCAATGCGGAGCAGCCAGGGCAGTGGGCACCAGGCTTTAGCCTCCCTTTCTCACCCTACAGAGGGCAGGCCCTTCAGCTCCATTCTCCTCCAAGGCTGCAGAGGGGGCAGGAATTGGGGGTGACAGGAGAGCTGTAAGGTCTCCAGTGGGTCATTCTGGGCCCAGAGATGGGTGCTGAAGCTCCCACGCCTGCCTGTGAAAATGGAGTCCTCTCTCACCTGGGAGAGCCAGGTGCTGCCCCGAGAAGGATGCATTTATGGCTTCGTGAAGTCTTTCCTGACCCCCGATGCTGCTGACTATAGagacaaagtctcactatgttgctcaggctggtcttgaactcctggcctcaagcgatcctcccacctcagcctcccaaagtgttgggattatagacatgagccactgcacctggccgaccttgggcaagttcttaaacccttcaaagcctcatttttctccaatcacaaaagggaaagatggtaatattttccccaccaaattcttGTCGGATGCCCTCACAGAATTGAGATTATGTACGTAAAACACCAGGTGCCTAACCCGGCACAGAGCAGGAGGGCTAAGCGTGACATCCAGCACGTGGTCAGTGGAATCCAGTATTCCTACCCACCTCTCTAGTCTCCCCTCCACCCCTCTCCCTTTCAGAGGCACCAAGCTGCTTGTGGTCTTGTCTATTCCCACTCCCTGCCTGACTGAACATTTTCTCCACCTCCTGATCATCAGCAGCAGAAACTGGCTGctcttcctcctgggtagacagccagactgtatttcccagctgcccctgcagtgagatgtggccatcggagccagcattggccaatggactctgcatgggagtgacgcatgctgcctccaggcttgtccctaaaacctcccacgtgtcctccgcctgctcttcccacctccaaggagcacggcaattgtggaagacccagattagtgatggcagaaccatagatgggaggaacctgggtccctgacttaaagtatcatggatttggatgttcccttagtgagaaataaacttccattgtgtttaagcctttatttgtttatagttggttacagcaactgccttcttttaattaaaacaCTCCtgctgct

Expression Profile(Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0.0557185	0.00603067	0.143306	0.00858201	0.0282842
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.00521677	0	0.0520671	0.160565	0.0348326
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0.0753038	0.0181345	0.0338091	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.130202	0	0.0740725	0.431056	0	0

Expression profile of NONHSAT000013 in Human tissues

Exosome Expression Profile(Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	0	0	0
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
0	0	0	0	0

Structure Visualization

DataSource: show detail information

See experimental data visualization in DMS dataset or PARS dataset

Isoforms

Transcript ID

NONHSAT000014.2

Data Sources

Source Name	Old Id
lncipedia	lnc-FAM138A-6-2_dup1
NONCODEv4	NONHSAT000013
noncodeV3	n381014
gencode	ENST00000417324.1
refseq	NR_026818
NAME	FAM138A
ensembl	ENST00000417324
refseq	NR_026820
NAME	FAM138F
PMID26117828	PNCT_HSA128065