An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONBNAT001967.1

General info


NONCODE TRANSCRIPT IDNONBNAT001967.1
NONCODE Gene IDNONBNAG001508.1
ChromosomeLK031894
Start Site144022
End Site145817
Strand-
Exon Number2
CNCI Score-0.3900820
Length428
AssemblyAST_PRJEB5043_v1
Other transcript VersionsNone

Sequence


>NONBNAT001967.1
AAAAAGGGAGAAAAAAATATAAAAAATTAACATGTAGTTAATCTTATTGGTATTCATTCAAGAATTTAACATTTTACCCAAAAAAATTCATTTGATTCAAGAATTCAAGATAGACTATTGGATGGTTCACACATTGCATATCTCGTCTGGTATATTTGGATGAACTTTTATAGAAGTACAGTGATCTATTTAAATTACTGGTCAACATTGAACCCCATGATAAAACTAATGTTTACTCAAAAAAAAAACTAAATACAATTTGCATGCATAACATCTTTCAATGGACAAAGGGGTAGTTCCTGAACCTACCACGTCAAGATTCGTTAAAAGGAGACTACATTTAAATATTGATACGAAAAATTAATTTAAAAGGAACGGTGGGAAGACATGAATCACGCGTCGAAGACACACCTACCCGGAGGGTTTTTAGAGAGGCAACAAAGAGACAAGCAAAGAGATGTGAGTTTGGTTTGGTTTTGGGTTTTTAGGGGGTTGGTAGGGTTTGAGGTCCATATGCCTCGATCTTTCTCTTCTTTTTCTTTTAATCTTTATTACAAAATTCGTCTAATTAAATCCACTCCATGATCCATCGAACCATGCATACATAGTAACATATATATATATACTATAATCCCAGCGAAGTTGTTGGATTCAGTGCAAACACTTGTCAAAGGAGCAGTCCCGATCTGATTCCATCTTATTTTCGTTGTCTATTCGACCTTGGCTTTGGCTTTTACCATCACATATACAACTCTTTAAATAAAAAATGTTTTTTTTTTTTTGTTAAGTTAAAAAATGTTTTCAATCACATATATCTTAGCTCTACGGTCAGAATAGACACCAGATACAAACTTTCGATTCCTTAGGAAGTAACGACTCTAACTATACTTTGTCTATGTACAAGTTGTGAGAAATATCCATCGTCAGATAATTAAAAACACTATTGACAGGCTTAATTAAACTATCAATAAATACGGCAACTTTTTCACCTCATGATACACGTAAGTTCTGTAGATGCATACATTTTTAACAGTCATGCATATACTTATCATAACTTATGGTTTTGCTTATGTGGGGATTCAACAAACATGCTTAGCTATATGGAACTCTCTCACGTCAATATGTATATTAATATGTTTTGCATTTACACATATCAGACACAATAGGTAACCATTACCCTCAAACCGGATTAACCAAATTCTTAATTTAACACGGATGTTTCTATATATATTTAGGTCTTTCATGTCATTAGTTTCTATATACAGTTGTTTCTTCATATCGAATGTAAAACTTTATACAAAACTAAGAAAGAAAATTTCTATCTATATGACCATATAAATTTTGTAAATATGTTGAGAAAAAATAAGACTTATAATCATACATACGTTCAATCCTTATATATAGTACTATTGTATAATATATATACGTGTGTGCCTGTGATAAAACTATTTATGTTAAACCATAATTAAAAGAAGCAAAACCTCAGAAGCTAAATGTTTATATCGATCGTCATCCAGATCAATCACAACTCGACACCATGTAGTAGTTGATAATAAGAAGGATGCATGAATGAAATAATCGATAAGGGTTATAATTTAGGGTTTCGAGGACAGATCGAGGCCAAGGTCGAACAGACAACGAAACAAAGATGAGAACAAATAAGATTGCTCACTTTGACAAGCCTAGCATCGAACCCAACCACTTTTGATCATCATCATCTCCGTCTTCTCTTCTGATATCTACCATGTATTTTTTATCTTTTTGAGTCTCAATATTATTCTTAAAAGGTTATAAG

Conservation

click here

If the retrieved noncode belongs to plant:
qSpecies: Species of query noncode; rSpecies: Species of subject noncode; qTranscript: Query lncRNA;
rTranscript: Subject lncRNA; pIdent: Percentage of identical matches; qCovs: Query coverage per subject;
qStart: Start of alignment in query noncode; qEnd: End of alignment in query noncode;
rStart: Start of alignment in subject noncode; rEnd: End of alignment in subject noncode; Evalue: Expect value


 
pIdent >=   qCovs >=   Evalue <=  
qSpeciesrSpeciesqTranscriptrTranscriptpIdentqCovsqStartqEndrStartrEndEvalue
B.napusB.rapaNONBNAT001967.1NONBRAT004005.197.56991771154723200.0
B.napusB.rapaNONBNAT001967.1NONBRAT004005.197.72997901795231033100.0

Data Sources

Source NameOld Id
PMID31090490PMID31090490