An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONATHT000861.1

General info


NONCODE TRANSCRIPT IDNONATHT000861.1
NONCODE Gene IDNONATHG000816.1
Chromosome1
Start Site26772595
End Site26772881
Strand-
Exon Number1
CNCI Score-0.4675871
Length286
Assemblytair10
Other transcript VersionsNone

Sequence


>NONATHT000861.1
AATGGTGGGAAGACATGAATCACACGTCGAAAACACACCTACCCGAAGGGTTTTGGAGAGTAGACAAAGAGACAAACATAGAGGTGTGAGTTTGGTTTGGTTTTGGGTTTTGGGGGGTTGGTAGTGTTTGAGGTCCATATGCCTCGATCTTCCGCTTCTATTAATTAATTTTCTCTATTAGAAATATTATCTAATTATTCCACTCCATCGAACCATGCACATATATAATGATATGTATAAGCCCATCAAAGTTTTTGAATTCAGTGCAAACACTTGTCAAAGGAGC

Expression Profile


Sperm cellsWhole seedlingsCotyledonsRootFlower receptaclesWhole root
00.13742700.2634080.4377190
Mature pollenSeedLeafStemsFlower
00.123807000.369738
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Conservation

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If the retrieved noncode belongs to plant:
qSpecies: Species of query noncode; rSpecies: Species of subject noncode; qTranscript: Query lncRNA;
rTranscript: Subject lncRNA; pIdent: Percentage of identical matches; qCovs: Query coverage per subject;
qStart: Start of alignment in query noncode; qEnd: End of alignment in query noncode;
rStart: Start of alignment in subject noncode; rEnd: End of alignment in subject noncode; Evalue: Expect value


qSpeciesrSpeciesqTranscriptrTranscriptpIdentqCovsqStartqEndrStartrEndEvalue
A.thalianaB.napusNONATHT000861.1NONBNAT000403.181.919942861954942e-61
A.thalianaB.napusNONATHT000861.1NONBNAT001967.182.629942863776772e-65
A.thalianaB.rapaNONATHT000861.1NONBRAT004005.183994286192922261e-67

Data Sources


Source NameOld Id
PMID31264223PMID31264223