Detail infomation of NONHSAG112262.1--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG112262.1

General info

NONCODE GENE ID	NONHSAG112262.1
Chromosome	chr5
Start Site	7862808
End Site	7863640
Strand	+
Length	832
Assembly	hg38
Class	Linc;
Other Gene Versions	None

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT248954.1

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.385072	0.939015	2.49908	0.898059	0.530362	0.575632
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.375492	0.615521	0.492546	0.170442	1.15165	5.00931
liver	liver_R	lung	lymphNode	ovary	placenta_R
1.02368	0	2.45175	0.989019	4.00619	0.124322
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
1.74598	0	2.16513	0.925682	1.79568	0.849962

Expression profile of NONHSAG112262 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
15.9868	16.2735	12.0536	18.0451	2.92129
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
2.1673	0	0	5.58607	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr5( len:832 )^T
      - Gorilla : chr17( len:832 )
      - Orangutan : chr5( len:832 )
      - Rhesus : chr6( len:831 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG112262.1	rs3733784	Gene expression of MTRR (probeID ILMN_1718932) in cerebellum in Alzheimer's disease cases and controls	22685416
NONHSAG112262.1	rs3733784	Gene expression of MTRR (probeID ILMN_1718932) in temporal cortex in Alzheimer's disease cases and controls	22685416
NONHSAG112262.1	rs3733784	Gene expression of MTRR in peripheral blood monocytes	20502693
NONHSAG112262.1	rs3733784	Gene expression of MTRR in Temporal cortex	20485568
NONHSAG112262.1	rs3733784	Gene expression of MTRR in Cerebellum	20485568
NONHSAG112262.1	rs3733784	Gene expression of MTRR in Frontal cortex	20485568

Potential Function

GO Number	Description
GO:0051384	response to glucocorticoid
GO:0046034	ATP metabolic process
GO:0022904	respiratory electron transport chain
GO:0044237	cellular metabolic process
GO:0042776	mitochondrial ATP synthesis coupled proton transport
GO:1901652	response to peptide
GO:0006366	transcription from RNA polymerase II promoter
GO:0048146	positive regulation of fibroblast proliferation
GO:0016485	protein processing
GO:0055114	oxidation-reduction process

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