Detail infomation of NONHSAG109615.1--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG109615.1

General info

NONCODE GENE ID	NONHSAG109615.1
Chromosome	chr19
Start Site	46344961
End Site	46346943
Strand	-
Length	1982
Assembly	hg38
Class	Linc;
Other Gene Versions	None

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT240080.1

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.392077	0.742083	0.374469	0.316932	0.189544	0.179861
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.371887	0.318103	0.511063	0.387532	0.440154	0.521349
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.405349	0.0574541	0.400399	0.686657	0.513437	0.63418
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.508677	1.37493	2.77222	3.16946	0.522837	0.564037

Expression profile of NONHSAG109615 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.93053	2.90841	0.926123	6.62241
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
7.3858	0	0	5.85659	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr19( len:1972 )
      - Gorilla : chr19( len:1968 )
      - Orangutan : chr19( len:1980 )
      - Rhesus : chr19( len:2292 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : chr6( len:1449 )
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG109615.1	rs4802307	Crohn's disease	23128233
NONHSAG109615.1	rs4802307	Triglycerides	20066028
NONHSAG109615.1	rs4802307	Total cholesterol	20686565
NONHSAG109615.1	rs4802307	Gene expression of THRSP in normal prepouch ileum	23474282
NONHSAG109615.1	rs4802307	Gene expression of CARTPT in normal prepouch ileum	23474282
NONHSAG109615.1	rs4802307	Gene expression of ALOX15 in normal prepouch ileum	23474282
NONHSAG109615.1	rs4802307	Gene expression of ACSM1 in normal prepouch ileum	23474282
NONHSAG109615.1	rs4802307	Gene expression of CPM in normal prepouch ileum	23474282
NONHSAG109615.1	rs4802307	Gene expression of OR5A2 in normal prepouch ileum	23474282
NONHSAG109615.1	rs4802307	Gene expression of HOXB1 in normal prepouch ileum	23474282
NONHSAG109615.1	rs4802307	Gene expression of LECT2 in normal prepouch ileum	23474282
NONHSAG109615.1	rs4802307	Gene expression of OR1S2 in normal prepouch ileum	23474282
NONHSAG109615.1	rs4802307	Gene expression of PPP5C [probe 3836760] in peripheral blood mononuclear cells	19222302

Potential Function

GO Number	Description
GO:0007155	cell adhesion
GO:0006366	transcription from RNA polymerase II promoter
GO:0007409	axonogenesis
GO:0007286	spermatid development
GO:0051384	response to glucocorticoid
GO:0016485	protein processing
GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0007281	germ cell development
GO:0042997	negative regulation of Golgi to plasma membrane protein transport
GO:0010628	positive regulation of gene expression

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