Detail infomation of NONHSAG109374.1--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG109374.1

General info

NONCODE GENE ID	NONHSAG109374.1
Chromosome	chr19
Start Site	40826563
End Site	40836069
Strand	+
Length	9506
Assembly	hg38
Class	Linc;
Other Gene Versions	None

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT239380.1

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.435863	0.661196	0.321993	0.4758	0.37927	0.299361
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.440651	1.37969	0.262854	0.363122	0.606406	0.316957
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.26123	0.0386043	0.277808	0.362929	0.440956	0.794883
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.598495	3.04883	0.811002	1.63974	0.90119	0.47165

Expression profile of NONHSAG109374 in Human tissues

Loading...

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	13.3319	2.53152	1.41641	6.37516
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
5.05747	0	0	4.88321	2.21679

Loading...

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr19( len:9526 )
      - Gorilla : N/A
      - Orangutan : chr19( len:9729 )
      - Rhesus : chr19( len:16537 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG109374.1	rs2644890	Gene expression of CYP2F1 in peripheral blood monocytes	20502693
NONHSAG109374.1	rs7251418	Nicotine dependence (smoking), cigarettes per day	20418888
NONHSAG109374.1	rs7251418	Smoking behavior	20418888
NONHSAG109374.1	rs7251418	Hypertension, combined control dataset	17554300
NONHSAG109374.1	rs7251418	Multiple complex diseases	17554300
NONHSAG109374.1	rs7251570	Nicotine dependence (smoking), cigarettes per day	20418888

Potential Function

GO Number	Description
GO:0016485	protein processing
GO:0048745	smooth muscle tissue development
GO:0006367	transcription initiation from RNA polymerase II promoter
GO:0051341	regulation of oxidoreductase activity
GO:0007155	cell adhesion
GO:0048146	positive regulation of fibroblast proliferation
GO:0010259	multicellular organismal aging
GO:0008016	regulation of heart contraction
GO:0002479	antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0060038	cardiac muscle cell proliferation

NONCODE

Introduce of NONCODE

Browse NONCODE

Search a gene/transcript

Statistics

Blast

Genome

ID Conversion

Download

Bio-tools

ncFANs

CNCI

lnc-GFP

lncRNA Analysis pipeline