Detail infomation of NONHSAG108571.1--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG108571.1

General info

NONCODE GENE ID	NONHSAG108571.1
Chromosome	chr17
Start Site	4639058
End Site	4644096
Strand	+
Length	3510
Assembly	hg38
Class	Linc;
Other Gene Versions	None

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT236962.1

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
2.02599	0.868749	0.422974	0.231275	1.46016	0.354088
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.285666	0.179254	0.0489588	0.111953	0.0318566	0.871672
liver	liver_R	lung	lymphNode	ovary	placenta_R
1.01568	0.185858	3.63423	1.09467	1.2298	2.42033
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.562485	0.0141124	4.27657	6.83167	0.965107	2.19619

Expression profile of NONHSAG108571 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
3.78947	0.0412332	1.6423	0	13.1256
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
10.7701	0	0	9.12949	0.612794

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr17( len:5072 )
      - Gorilla : chr17( len:5457 )
      - Orangutan : chr17( len:5082 )
      - Rhesus : chr16( len:5917 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG108571.1	rs11078528	Gene expression of ARRB2 (ENSG00000141480) in dendritic cells	22233810

Potential Function

GO Number	Description
GO:0030048	actin filament-based movement
GO:0007409	axonogenesis
GO:0016485	protein processing
GO:0016192	vesicle-mediated transport
GO:0007286	spermatid development
GO:0035082	axoneme assembly
GO:0051384	response to glucocorticoid
GO:0042997	negative regulation of Golgi to plasma membrane protein transport
GO:0072673	lamellipodium morphogenesis
GO:1900224	positive regulation of nodal signaling pathway involved in determination of lateral mesoderm left/right asymmetry

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