Detail infomation of NONHSAG103516.1--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG103516.1

General info

NONCODE GENE ID	NONHSAG103516.1
Chromosome	chrX
Start Site	107935741
End Site	107959208
Strand	+
Length	461
Assembly	hg38
Class	Linc;
Other Gene Versions	None

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT222900.1

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	0.309134	0.762303	0.156895	0.158541	0.214095
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.135444	0.188968	0	0	1.86901	1.31132
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0.074472	0.397394	1.22024	0.152268
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
6.87266	0	0.696391	0.648852	0.849625	0

Expression profile of NONHSAG103516 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	1.78864	0	3.31429	3.49411
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
3.87683	0	0	3.01796	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chrX( len:29972 )
      - Gorilla : chrX( len:27023 )
      - Orangutan : chrX( len:22849 )
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG103516.1	rs2179582	1-Methylnicotinamide:3-Aminoisobutyrate	21572414

Potential Function

GO Number	Description
GO:0031581	hemidesmosome assembly
GO:0030155	regulation of cell adhesion
GO:0042246	tissue regeneration
GO:0006366	transcription from RNA polymerase II promoter
GO:0051693	actin filament capping
GO:0050852	T cell receptor signaling pathway
GO:1901652	response to peptide
GO:0007219	Notch signaling pathway
GO:0010629	negative regulation of gene expression
GO:0016485	protein processing

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