Detail infomation of NONHSAG073950.1--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG073950.1

General info

NONCODE GENE ID	NONHSAG073950.1
Chromosome	chr17
Start Site	4644741
End Site	4651267
Strand	+
Length	6526
Assembly	hg38
Class	Linc;
Other Gene Versions	None

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT176722.1

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.210629	0.117655	0.0642642	0.0891046	0.118458	0.0208676
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.00519159	0.0161153	0.00857877	0.00835217	0.00594866	0.060905
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.130647	0	0.139036	0.151666	0.0948159	0.144817
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0605971	0.0212162	1.65297	2.01252	0.0511139	0.0800364

Expression profile of NONHSAG073950 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.110886	1.26749	0	7.6134
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
5.12254	0	0	4.19581	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr17( len:7798 )
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG073950.1	rs748694	Gene expression of ALOX15 in blood	21829388
NONHSAG073950.1	rs748694	Gene expression of ARRB2 in blood	21829388
NONHSAG073950.1	rs748694	Gene expression of ALOX15 in normal prepouch ileum	23474282
NONHSAG073950.1	rs748694	Gene expression of ZMYND15 [probe 3707141] in peripheral blood mononuclear cells	19222302

Potential Function

GO Number	Description
GO:0007286	spermatid development
GO:0006366	transcription from RNA polymerase II promoter
GO:0007409	axonogenesis
GO:0007155	cell adhesion
GO:0042997	negative regulation of Golgi to plasma membrane protein transport
GO:0051384	response to glucocorticoid
GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0016485	protein processing
GO:0030048	actin filament-based movement
GO:0007200	phospholipase C-activating G-protein coupled receptor signaling pathway

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