Detail infomation of NONHSAG072936.1--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG072936.1

General info

NONCODE GENE ID	NONHSAG072936.1
Chromosome	chr17
Start Site	8190147
End Site	8192639
Strand	+
Length	695
Assembly	hg38
Class	Linc;
Other Gene Versions	None

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT174844.1

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0750522	0.340517	0.0797257	0.0820731	0.166987	0.0513273
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.0768342	0.12327	0	0.109454	0.184182	0.0692479
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.0164433	0	0.0726221	0.26066	0.209862	0.398091
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.188778	0.0153096	1.46499	2.3465	0.0653093	0.0266677

Expression profile of NONHSAG072936 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	4.68264	0	2.64112	6.67467
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
7.3965	0	0	4.67997	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr17( len:2459 )
      - Gorilla : chr17( len:2503 )
      - Orangutan : N/A
      - Rhesus : chr16( len:3130 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG072936.1	rs2278636	Gene expression of TMEM107 in peripheral blood monocytes	20502693
NONHSAG072936.1	rs2278636	Gene expression of MGC10744 in CEU-CHB-JPT-YRI lymphoblastoid cell lines	17873874
NONHSAG072936.1	rs2278636	Gene expression of AURKB in peripheral blood monocytes	20502693
NONHSAG072936.1	rs2278636	Gene expression of CASP9 in peripheral blood monocytes	20502693
NONHSAG072936.1	rs2278636	Gene expression of PREI3 in peripheral blood monocytes	20502693
NONHSAG072936.1	rs2278636	Gene expression of KTN1 in peripheral blood monocytes	20502693
NONHSAG072936.1	rs2278636	LDL cholesterol	20686565
NONHSAG072936.1	rs2278636	Total cholesterol	20686565

Potential Function

GO Number	Description
GO:0006366	transcription from RNA polymerase II promoter
GO:0007409	axonogenesis
GO:0007155	cell adhesion
GO:0007286	spermatid development
GO:0042997	negative regulation of Golgi to plasma membrane protein transport
GO:0016485	protein processing
GO:0007200	phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0051384	response to glucocorticoid
GO:0007281	germ cell development
GO:0030048	actin filament-based movement

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