Detail infomation of NONHSAG058444.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG058444.2

General info

NONCODE GENE ID	NONHSAG058444.2
Chromosome	chr1
Start Site	211599553
End Site	211609554
Strand	-
Length	6745
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG058444.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT152854.1

NONHSAT152855.1

NONHSAT152856.1

NONHSAT152857.1

NONHSAT227565.1

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.147231	0.308734	0.248407	0.321108	0.198663	0.0467567
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.200692	0.222825	0.134763	0.0968656	0.163285	0.191831
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.132663	0.0411567	0.136683	0.193576	0.136143	0.137097
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.18907	0.0775013	3.72839	4.0792	0.403854	0.0760774

Expression profile of NONHSAG058444 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.0214572	1.11511	0	4.76116
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
4.72403	0	0	5.7114	0.405976

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr1( len:10196 )
      - Gorilla : chr1( len:10071 )
      - Orangutan : chr1( len:9980 )
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG058444.2	rs12403692	Recurrent early onset major depressive disorder	20125088
NONHSAG058444.2	rs6702177	Serum ratio of (glycine)/(tetradecanedioate)	21886157
NONHSAG058444.2	rs4951536	Weight	0
NONHSAG058444.2	rs4951536	Weight	0
NONHSAG058444.2	rs4951536	Serum ratio of (3-methylxanthine)/(theobromine)	21886157
NONHSAG058444.2	rs4951536	Suicide attempts in bipolar disorder (males)	21423239
NONHSAG058444.2	rs11582144	Gene expression of HNRNPA3P1 in peripheral blood monocytes	20502693
NONHSAG058444.2	rs11582144	Serum ratio of (caffeine)/(malate)	21886157

Potential Function

GO Number	Description
GO:0007155	cell adhesion
GO:0006366	transcription from RNA polymerase II promoter
GO:0007286	spermatid development
GO:0007409	axonogenesis
GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0042997	negative regulation of Golgi to plasma membrane protein transport
GO:0051384	response to glucocorticoid
GO:0016485	protein processing
GO:0030048	actin filament-based movement
GO:0042060	wound healing

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