Detail infomation of NONHSAG057262.1--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG057262.1

General info

NONCODE GENE ID	NONHSAG057262.1
Chromosome	chr1
Start Site	224200546
End Site	224205132
Strand	+
Length	4586
Assembly	hg38
Class	Linc;
Other Gene Versions	None

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT150641.1

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.38176	1.42645	4.58329	0.505059	1.43576	0.190978
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.0749943	0.322179	0.0802451	0.0120577	0.682629	1.28024
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.0782812	0	0.0365568	0.0440029	1.40187	0.336742
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0482868	0	0.689713	1.48265	0.58086	0.038324

Expression profile of NONHSAG057262 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	2.94802	1.25697	0.749611	3.08304
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
3.36452	0	0	6.37744	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG057262.1	rs10916470	Major depressive disorder (narrow definition) (females)	20038947

Potential Function

GO Number	Description
GO:0007179	transforming growth factor beta receptor signaling pathway
GO:0009404	toxin metabolic process
GO:0042326	negative regulation of phosphorylation
GO:0016485	protein processing
GO:0034453	microtubule anchoring
GO:0033628	regulation of cell adhesion mediated by integrin
GO:0060271	cilium morphogenesis
GO:0007274	neuromuscular synaptic transmission
GO:0006974	cellular response to DNA damage stimulus
GO:0006261	DNA-dependent DNA replication

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