Detail infomation of NONHSAG043252.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG043252.2

General info

NONCODE GENE ID	NONHSAG043252.2
Chromosome	chr6
Start Site	26602732
End Site	26606661
Strand	+
Length	3929
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG043252.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT206995.1

NONHSAT108299.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.00443078	0.107508	0.0211554	0.0216058	0.00216814	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.0222848	0	0.0141898	0	0
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0	0	0.0164792	0.0208525
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.012619	0.00104445	1.80887	1.81837	0.03253	0.00540693

Expression profile of NONHSAG043252 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	1.01249	1.91434	0.167432	4.83288
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
4.38201	0	0	4.01765	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr6( len:3925 )
      - Gorilla : chr6( len:3930 )
      - Orangutan : chr6( len:3920 )
      - Rhesus : chr4( len:3852 )^T
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG043252.2	rs9379899	Lung function, forced expiratory volume in 1 second (FEV1)	20010835
NONHSAG043252.2	rs9379899	Lung function, ratio of forced expiratory volume in 1 second (FEV1) to forced vital capacity (FVC) (FEV1/FVC)	20010835
NONHSAG043252.2	rs6911540	Rheumatoid arthritis	20453842
NONHSAG043252.2	rs12205310	Gene expression of BTN3A2///BTN3A3 in blood	21829388
NONHSAG043252.2	rs12205310	Gene expression of ABT1 [probe ILMN_11701] in osteoblasts treated with PGE2	21283786
NONHSAG043252.2	rs12205310	Gene expression of [probe 3390050 centered at chr6:26795418] in blood	21829388
NONHSAG043252.2	rs12205310	Gene expression of BTN2A1 in blood	21829388
NONHSAG043252.2	rs12205310	Gene expression of BTN3A3 in blood	21829388
NONHSAG043252.2	rs9379902	Rheumatoid arthritis	20453842

Potential Function

GO Number	Description
GO:0006366	transcription from RNA polymerase II promoter
GO:0007155	cell adhesion
GO:0007286	spermatid development
GO:0007409	axonogenesis
GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0042997	negative regulation of Golgi to plasma membrane protein transport
GO:0051384	response to glucocorticoid
GO:0042060	wound healing
GO:0016485	protein processing
GO:0030048	actin filament-based movement

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