Detail infomation of NONHSAG022080.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG022080.2

General info

NONCODE GENE ID	NONHSAG022080.2
Chromosome	chr17
Start Site	48557261
End Site	48560333
Strand	+
Length	846
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG022080.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT175305.1

NONHSAT054411.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
2.22716	2.94846	1.34079	0.815704	1.23961	1.2391
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
1.25852	1.58933	0.964765	1.33337	0.985684	4.30549
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.735615	0.0788097	1.82116	4.01322	2.18791	2.18869
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
1.82226	1.34734	1.44079	2.15341	1.42604	0.965333

Expression profile of NONHSAG022080 in Human tissues

Loading...

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	5.92706	11.8017	15.2862
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
12.1432	0	0	12.6096	0

Loading...

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr17( len:3076 )
      - Gorilla : chr5( len:3059 )
      - Orangutan : N/A
      - Rhesus : chr16( len:3093 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : chr12( len:2954 )
      - Cow : chr19( len:2972 )
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG022080.2	rs4793927	Body mass index (BMI)	19557197
NONHSAG022080.2	rs4793927	Body mass index	19557197
NONHSAG022080.2	rs4793927	Height	20881960

Potential Function

GO Number	Description
GO:0045732	positive regulation of protein catabolic process
GO:1901652	response to peptide
GO:0006821	chloride transport
GO:0030302	deoxynucleotide transport
GO:0007612	learning
GO:0007568	aging
GO:0048015	phosphatidylinositol-mediated signaling
GO:0006811	ion transport
GO:0051384	response to glucocorticoid
GO:0016485	protein processing

NONCODE

Introduce of NONCODE

Browse NONCODE

Search a gene/transcript

Statistics

Blast

Genome

ID Conversion

Download

Bio-tools

ncFANs

CNCI

lnc-GFP

lncRNA Analysis pipeline