An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG021683.2

General info

NONCODE GENE IDNONHSAG021683.2
Chromosomechr17
Start Site39029905
End Site39053205
Strand+
Length5322
Assemblyhg38
ClassLinc;
Other Gene VersionsNONHSAG021683.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID
NONHSAT053396.2
NONHSAT053399.2
NONHSAT053400.2

Expression Profile (Data Source:Human Body Map)

adiposeadrenalbrainbrain_Rbreastcolon
00.001527410.008455260.015724202.46853
foreskinheartheart_RHLF_1HLF_2kidney
000.0423305000
liverliver_RlunglymphNodeovaryplacenta_R
00000.008233980.00758633
prostateskeltalMuscletestestestes_RthyroidwhiteBloodCell
0.78637500.002760030.029996800
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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine
(Squamous Cell Carcinoma Cell Line Exosomes)		BJ_cellLine
(Foreskin Fibroblast Cell Line Exosomes)		HepG2_cellLine
(Hepatocellular Carcinoma Cell Line Exosomes)		HUVEC_cellLine
(Human Umbilical Vein Endothelial Cell Line Exosomes)		invasive_NFPAs
(Invasive Non-functional Pituitary Adenomas Exosomes)
004.52174012.2267
non-invasive_NFPAs
(Non-invasive Non-functional Pituitary Adenomas Exosomes)		MCF7_cellLine
(Human Breast Cancer Cell Line Exosomes)		MDA-MB-231_cellLine
(Human Breast Cancer Cell Line Exosomes)		tuberculosis_patients_serum
(Active Tuberculosis Patients Serum Exosomes)		normal_people_blood
(Normal People Blood Exosomes)
11.8316008.378860
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Conservation Info

  • Chordata
    • Vertebrates
    • Actinopteryqii
      • Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE IDGene SymbolDisease nameSource DatabaseSource PMID

Mutations:

NONCODE IDSNP IDGWAS traitSource PMID
NONHSAG021683.2rs7215468Gene expression of PLXDC1 (probeID ILMN_1815568) in temporal cortex in Alzheimer's disease cases and controls22685416
NONHSAG021683.2rs7215468Gene expression of PLXDC1 (probeID ILMN_1815568) in cerebellum in non-Alzheimer's disease samples22685416
NONHSAG021683.2rs7215468Gene expression of PLXDC1 (probeID ILMN_1815568) in cerebellum in Alzheimer's disease cases and controls22685416
NONHSAG021683.2rs7215468Gene expression of PLXDC1 (probeID ILMN_1815568) in temporal cortex in Alzheimer's disease cases22685416
NONHSAG021683.2rs7215468Gene expression of PLXDC1 (probeID ILMN_1815568) in temporal cortex in non-Alzheimer's disease samples22685416
NONHSAG021683.2rs8071973Gene expression of PLXDC1 (probeID ILMN_1815568) in cerebellum in Alzheimer's disease cases and controls22685416
NONHSAG021683.2rs7218784Gene expression of PLXDC1 (probeID ILMN_1815568) in temporal cortex in Alzheimer's disease cases and controls22685416
NONHSAG021683.2rs7218784Gene expression of PLXDC1 (probeID ILMN_1815568) in cerebellum in non-Alzheimer's disease samples22685416
NONHSAG021683.2rs7218784Gene expression of PLXDC1 (probeID ILMN_1815568) in cerebellum in Alzheimer's disease cases and controls22685416
NONHSAG021683.2rs7218784Gene expression of PLXDC1 (probeID ILMN_1815568) in temporal cortex in Alzheimer's disease cases22685416
NONHSAG021683.2rs7218784Gene expression of PLXDC1 (probeID ILMN_1815568) in temporal cortex in non-Alzheimer's disease samples22685416
NONHSAG021683.2rs7218784Alzheimer's disease (APOE4 positive)19734902
NONHSAG021683.2rs7207364Gene expression of PLXDC1 (probeID ILMN_1815568) in temporal cortex in Alzheimer's disease cases and controls22685416
NONHSAG021683.2rs7207364Gene expression of PLXDC1 (probeID ILMN_1815568) in cerebellum in non-Alzheimer's disease samples22685416
NONHSAG021683.2rs7207364Gene expression of PLXDC1 (probeID ILMN_1815568) in cerebellum in Alzheimer's disease cases and controls22685416
NONHSAG021683.2rs7207364Gene expression of PLXDC1 (probeID ILMN_1815568) in temporal cortex in Alzheimer's disease cases22685416
NONHSAG021683.2rs7207364Gene expression of PLXDC1 (probeID ILMN_1815568) in temporal cortex in non-Alzheimer's disease samples22685416
NONHSAG021683.2rs12600916Gene expression of PLXDC1 in Cerebellum20485568
NONHSAG021683.2rs12600916Gene expression of PLXDC1 in Frontal cortex20485568
NONHSAG021683.2rs12600916Gene expression of PLXDC1 (probeID ILMN_1815568) in breast tumors22522925
NONHSAG021683.2rs7223157Gene expression of PLXDC1 (probeID ILMN_1815568) in cerebellum in Alzheimer's disease cases and controls22685416
NONHSAG021683.2rs7223157Gene expression of PLXDC1 in blood21829388
NONHSAG021683.2rs7223157Gene expression of PLXDC1 in CD4+ lymphocytes20833654
NONHSAG021683.2rs9912445Gene expression of PLXDC1 in Frontal cortex20485568
NONHSAG021683.2rs9912445Gene expression of PLXDC1 (probeID ILMN_1815568) in cerebellum in Alzheimer's disease cases and controls22685416
NONHSAG021683.2rs9912445Gene expression of PLXDC1 [probe 214081_at] in prefrontal cortex20351726
NONHSAG021683.2rs11868791Gene expression of PLXDC1 in Cerebellum20485568
NONHSAG021683.2rs11868791Gene expression of PLXDC1 in Frontal cortex20485568
NONHSAG021683.2rs7209110Gene expression of PLXDC1 in Cerebellum20485568
NONHSAG021683.2rs7209110Gene expression of PLXDC1 in Frontal cortex20485568

Potential Function

GO NumberDescription
GO:0006367transcription initiation from RNA polymerase II promoter
GO:0001300chronological cell aging
GO:0051384response to glucocorticoid
GO:0048745smooth muscle tissue development
GO:0043154negative regulation of cysteine-type endopeptidase activity involved in apoptotic process
GO:0016485protein processing
GO:0035690cellular response to drug
GO:0007249I-kappaB kinase/NF-kappaB signaling
GO:0007040lysosome organization
GO:0031098stress-activated protein kinase signaling cascade

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