Detail infomation of NONHSAG020620.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG020620.2

General info

NONCODE GENE ID	NONHSAG020620.2
Chromosome	chr17
Start Site	5074993
End Site	5078372
Strand	-
Length	1433
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG020620.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT145154.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.450628	0.711265	1.12014	0.458602	0.899223	0.873917
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.327655	0.287531	0.0431045	0.0432282	0.391461	0.969206
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.630835	0	0.661361	1.07725	0.832708	0.285009
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.840667	0.57	2.30761	1.43206	0.620647	1.01428

Expression profile of NONHSAG020620 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.237206	1.74958	0.459066	12.9608
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
8.78047	0	0	11.0182	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG020620.2	rs12601694	Gene expression of RNF167 in peripheral blood monocytes	20502693
NONHSAG020620.2	rs12601694	Gene expression of UNQ5783 [probe ILMN_16188] in osteoblasts with treatment interaction	21283786
NONHSAG020620.2	rs12601694	Gene expression of DKFZP566H073 probe [GI_14149701-S] in brain cortex with no Alzheimer's interaction	19361613

Potential Function

GO Number	Description
GO:0007155	cell adhesion
GO:0006366	transcription from RNA polymerase II promoter
GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0090501	RNA phosphodiester bond hydrolysis
GO:0016485	protein processing
GO:0001501	skeletal system development
GO:0010628	positive regulation of gene expression
GO:0051345	positive regulation of hydrolase activity
GO:0019886	antigen processing and presentation of exogenous peptide antigen via MHC class II
GO:0030259	lipid glycosylation

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