Detail infomation of NONHSAG017772.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG017772.2

General info

NONCODE GENE ID	NONHSAG017772.2
Chromosome	chr15
Start Site	86079565
End Site	86125492
Strand	+
Length	492
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG017772.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT048117.2

NONHSAT048118.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.476136	1.52179	0.146141	0	0.719116	0.062419
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.607568	0.145448	0	0	0.0275622
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	1.08978	0	0.973679	1.20696
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.392945	0	0	0.11758	3.01315	0.199393

Expression profile of NONHSAG017772 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	0	0	6.55956
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
6.23652	0	0	11.296	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr15( len:48817 )
      - Gorilla : chr15( len:45577 )
      - Orangutan : chr15( len:48702 )^T
      - Rhesus : chr7( len:46417 )
    - Rodents
      - Mouse : N/A
      - Rat : chr1( len:42488 )
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG017772.2	rs930569	Gene expression of PDE8A in normal prepouch ileum	23474282
NONHSAG017772.2	rs1496871	Refractive error	23474815
NONHSAG017772.2	rs1899859	Refractive error	23474815
NONHSAG017772.2	rs12908584	Schizophrenia	19571809
NONHSAG017772.2	rs11631677	Schizophrenia	19571809
NONHSAG017772.2	rs7173050	Gene expression of CHCHD6 in peripheral blood monocytes	20502693
NONHSAG017772.2	rs16948444	Fasting insulin (interaction)	24204828
NONHSAG017772.2	rs16948444	Homeostasis model assessment of insulin resistance (interaction)	24204828
NONHSAG017772.2	rs17592813	Waist hip ratio	20935629
NONHSAG017772.2	rs17592847	Waist hip ratio	20935629
NONHSAG017772.2	rs12914656	Homeostasis model assessment of insulin resistance (interaction)	24204828
NONHSAG017772.2	rs17592910	Waist hip ratio	20935629
NONHSAG017772.2	rs1822638	Total cholesterol	20339536

Potential Function

GO Number	Description
GO:2000611	positive regulation of thyroid hormone generation
GO:0016485	protein processing
GO:0007281	germ cell development
GO:0045747	positive regulation of Notch signaling pathway
GO:0031581	hemidesmosome assembly
GO:0001938	positive regulation of endothelial cell proliferation
GO:0030155	regulation of cell adhesion
GO:0030317	sperm motility
GO:0040008	regulation of growth
GO:0060347	heart trabecula formation

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