Detail infomation of NONHSAG017411.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG017411.2

General info

NONCODE GENE ID	NONHSAG017411.2
Chromosome	chr15
Start Site	74350767
End Site	74364620
Strand	+
Length	3702
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG017411.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT047227.2

NONHSAT047228.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0047232	0.166293	0.518655	0.0575204	0.191832	0.0461977
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0.0105402	0	0	0.0172043	0.0142763
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.099948	0.0732018	0.02585	0.163039	0.147407	0.0111036
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.0748577	0.0177896	3.69634	5.70667	0.208075	0.0211067

Expression profile of NONHSAG017411 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.431838	0.677241	0	8.73323
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
7.49409	0	0	7.76827	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG017411.2	rs7174179	Advanced age-related macular degeneration	23455636
NONHSAG017411.2	rs7174179	Advanced age-related macular degeneration (choroidal neovascularization) vs. no AMD	23455636

Potential Function

GO Number	Description
GO:0007409	axonogenesis
GO:0006366	transcription from RNA polymerase II promoter
GO:0007155	cell adhesion
GO:0007286	spermatid development
GO:0042997	negative regulation of Golgi to plasma membrane protein transport
GO:0030048	actin filament-based movement
GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0051384	response to glucocorticoid
GO:0007200	phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0016485	protein processing

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