Detail infomation of NONHSAG009840.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG009840.2

General info

NONCODE GENE ID	NONHSAG009840.2
Chromosome	chr11
Start Site	120008603
End Site	120012158
Strand	-
Length	562
Assembly	hg38
Class	Linc;
Other Gene Versions	NONHSAG009840.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT024705.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0269699	0.0258037	0	0	0.819928	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0.0420601	0.0239148
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0.824883	0	0.0465182	4.91872
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
2.0882	0	0.157875	0.193986	0	0

Expression profile of NONHSAG009840 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0	0	0	11.1306
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
11.4265	0	0	11.5617	0

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr11( len:3545 )
      - Gorilla : chr11( len:3593 )
      - Orangutan : chr11( len:3567 )
      - Rhesus : chr14( len:3544 )
    - Rodents
      - Mouse : N/A
      - Rat : chr8( len:4205 )
    - Laurasiatheria
      - Pig : chr9( len:3492 )
      - Cow : chr15( len:3531 )
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID

Gene Symbol

Disease name

Source Database

Source PMID

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG009840.2	rs1944512	Gene expression of ATP5I in Caudal pons	20485568

Potential Function

GO Number	Description
GO:0007179	transforming growth factor beta receptor signaling pathway
GO:0032259	methylation
GO:0071157	negative regulation of cell cycle arrest
GO:0045599	negative regulation of fat cell differentiation
GO:0051384	response to glucocorticoid
GO:0014050	negative regulation of glutamate secretion
GO:0016485	protein processing
GO:0035634	response to stilbenoid
GO:0030885	regulation of myeloid dendritic cell activation
GO:0007155	cell adhesion

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