Detail infomation of NONHSAG000181.3--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG000181.3

General info

NONCODE GENE ID	NONHSAG000181.3
Chromosome	chr1
Start Site	3055438
End Site	3070489
Strand	-
Length	14408
Assembly	hg38
Class	Antisense;
Other Gene Versions	NONHSAG000181.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT151001.1

NONHSAT226293.1

NONHSAT226294.1

NONHSAT226295.1

NONHSAT226296.1

NONHSAT226297.1

NONHSAT226298.1

NONHSAT226299.1

NONHSAT226300.1

NONHSAT226301.1

NONHSAT000492.2

NONHSAT000493.2

NONHSAT000494.2

NONHSAT000496.2

NONHSAT000498.2

NONHSAT000500.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0.0017227	0.00390134	0.00364096	0.0113304	0.000112398	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0.00346061	0.0189729	0	0	0	0.0111044
liver	liver_R	lung	lymphNode	ovary	placenta_R
0	0	0.00541343	0	0.00588786	0.0027322
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0	0.000109994	0.00148244	0.0380214	0.0188341	0

Expression profile of NONHSAG000181 in Human tissues

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Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	0.0371394	2.99244	0.0147282	9.61962
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
11.9534	0	0	8.25195	0.131095

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Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : N/A
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : N/A
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG000181.3	lnc-TTC34-3	clear cell renal cell carcinoma	Lnc2Cancer	25685243
NONHSAG000181.3	LINC00982	stomach cancer	Lnc2Cancer	26334618
NONHSAG000181.3	LINC00982	gastric cancer	Lnc2Cancer	26334618
NONHSAG000181.3	LINC00982	gastric cancer	LncRNAWiki	0

Mutations:

NONCODE ID	SNP ID	GWAS trait	Source PMID
NONHSAG000181.3	rs2993480	Serum ratio of (decanoylcarnitine)/(hexanoylcarnitine)	21886157
NONHSAG000181.3	rs2993480	Autism	20663923
NONHSAG000181.3	rs1125017	Autism	20663923
NONHSAG000181.3	rs2376821	Autism	20663923
NONHSAG000181.3	rs2376821	Autism with verbal ability	20663923
NONHSAG000181.3	rs2376821	Autism with high IQ	20663923
NONHSAG000181.3	rs2376821	Serum ratio of (caffeine)/(paraxanthine)	21886157
NONHSAG000181.3	rs2297828	Gene expression of C1QL2 in Temporal cortex	20485568
NONHSAG000181.3	rs2297829	General white matter integrity factor	22425255

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