Detail infomation of NONHSAG000103.2--NONCODE

An integrated knowledge database dedicated to ncRNAs, especially lncRNAs.

Detail infomation of NONHSAG000103.2

General info

NONCODE GENE ID	NONHSAG000103.2
Chromosome	chr1
Start Site	1405460
End Site	1405752
Strand	-
Length	292
Assembly	hg38
Class	Sense No Exonic;
Other Gene Versions	NONHSAG000103.1(old version)

Transcripts in Gene

NONCODE TRANSCRIPT ID

NONHSAT000312.2

Expression Profile (Data Source:Human Body Map)

adipose	adrenal	brain	brain_R	breast	colon
0	1.4998	0.438147	0	2.02645	0
foreskin	heart	heart_R	HLF_1	HLF_2	kidney
0	0	0	0	0	0.257858
liver	liver_R	lung	lymphNode	ovary	placenta_R
0.0750237	0	0.180567	0.144939	0.865537	0
prostate	skeltalMuscle	testes	testes_R	thyroid	whiteBloodCell
0.128996	0	0.752877	0	4.32398	0

Expression profile of NONHSAG000103 in Human tissues

Loading...

Exosome Expression Profile (Data Source: NCBI GEO)

A431_cellLine (Squamous Cell Carcinoma Cell Line Exosomes)	BJ_cellLine (Foreskin Fibroblast Cell Line Exosomes)	HepG2_cellLine (Hepatocellular Carcinoma Cell Line Exosomes)	HUVEC_cellLine (Human Umbilical Vein Endothelial Cell Line Exosomes)	invasive_NFPAs (Invasive Non-functional Pituitary Adenomas Exosomes)
0	28.5612	28.3275	20.1667	5.51639
non-invasive_NFPAs (Non-invasive Non-functional Pituitary Adenomas Exosomes)	MCF7_cellLine (Human Breast Cancer Cell Line Exosomes)	MDA-MB-231_cellLine (Human Breast Cancer Cell Line Exosomes)	tuberculosis_patients_serum (Active Tuberculosis Patients Serum Exosomes)	normal_people_blood (Normal People Blood Exosomes)
7.04188	0	0	3.18072	0

Loading...

Conservation Info

Chordata
- Vertebrates
  - Manmals
    - Primates
      - Human
      - Chimp : chr1( len:292 )
      - Gorilla : N/A
      - Orangutan : N/A
      - Rhesus : chrUn_JH291010( len:290 )
    - Rodents
      - Mouse : N/A
      - Rat : N/A
    - Laurasiatheria
      - Pig : N/A
      - Cow : N/A
    - Opossum : N/A
    - Platypus : N/A
  - Birds
    - Chicken : N/A
- Actinopteryqii
  - Zebrafish : N/A

Note: T = There are transcripts in this region.

Disease related

Disease:

NONCODE ID	Gene Symbol	Disease name	Source Database	Source PMID
NONHSAG000103.2	7SL	AIDS,dermatomyositis	LncRNAWiki	0
NONHSAG000103.2	7SL	AIDS	LncRNADisease	20926562
NONHSAG000103.2	7SL	AIDS	LncRNADisease	16489186
NONHSAG000103.2	7SL	dermatomyositis	LncRNADisease	16142868
NONHSAG000103.2	7SL	Leishmania	LncRNADisease	15955815
NONHSAG000103.2	7SL	Leishmania	LncRNADisease	20392923
NONHSAG000103.2	7SL	Leishmania	LncRNADisease	20856851
NONHSAG000103.2	7SL	Leishmania	LncRNADisease	20561310
NONHSAG000103.2	7SL	polymyositis	LncRNADisease	16142868

Mutations:

NONCODE ID

SNP ID

GWAS trait

Source PMID

Potential Function

GO Number	Description
GO:0000187	activation of MAPK activity
GO:0010880	regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum
GO:0007409	axonogenesis
GO:0007200	phospholipase C-activating G-protein coupled receptor signaling pathway
GO:0032259	methylation
GO:0007568	aging
GO:0010628	positive regulation of gene expression
GO:0007205	protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0051289	protein homotetramerization
GO:2000480	negative regulation of cAMP-dependent protein kinase activity

NONCODE

Introduce of NONCODE

Browse NONCODE

Search a gene/transcript

Statistics

Blast

Genome

ID Conversion

Download

Bio-tools

ncFANs

CNCI

lnc-GFP

lncRNA Analysis pipeline