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Seqeunces of NONOCDEv6

SpeciesDownload AddressMD5
HumanNONCODEv6_human.fa.gz71eb68530792def450bc436b43e97513
MouseNONCODEv6_mouse.fa.gz9c2e5402dceed16d02f74270c222e3f7
CowNONCODEv6_cow.fa.gz4e1c36b1774b40dc8c49fafe8e7fa69f
RatNONCODEv6_rat.fa.gz3e5eb5bddc88d2473383343ee8e2b9fb
ChickenNONCODEv6_chicken.fa.gzd771fa576e6dd386e24c585192bb737c
C.ElegansNONCODEv6_celegans.fa.gz73c8c2c671b61c2806147cead6965fc6
D.MelanogasterNONCODEv6_fruitfly.fa.gz90711cd04f73ec8791b39e623ab1360d
ZebrafishNONCODEv6_zebrafish.fa.gz7c915acbb26c83d89bbf54c8345bbdd5
YeastNONCODEv6_yeast.fa.gz3f068ec1671cd6865d21b93df5ac4835
ChimpNONCODEv6_chimp.fa.gz349ae801226a52f015ad5230b0373800
GorillaNONCODEv6_gorilla.fa.gz81c6bb93ac866554f0c9a27407c94e2a
OrangutanNONCODEv6_orangutan.fa.gz58dff623e05c0b1364b226dabc34fce9
RhesusNONCODEv6_rhesus.fa.gzfa110411a7e83777b0703586e691da7f
OpossumNONCODEv6_opossum.fa.gz11cfab7b60185e48876013e17e5c9a4b
PlatypusNONCODEv6_platypus.fa.gz15aec74194aa0e2f94d86b49ce0d3ae8
PigNONCODEv6_pig.fa.gz09694f22b454a1598f167f9f92c1ea7b
A. thalianaNONCODEv6_ATH.fa.gz2f60b2477d7dc1c2a7297ba95c503498
B. napusNONCODEv6_BNA.fa.gzc33effdf4835e3d7a9ea2b65feda741b
B. rapaNONCODEv6_BRA.fa.gzf94af0c5060fea5d1def323bef76beb5
QuinoaNONCODEv6_CQU.fa.gz55a414bd0046d01a94c679a188182a68
C. reinhardtiiNONCODEv6_CRE.fa.gz86bee847aeebc3228769809e28c03acf
CucumberNONCODEv6_CSA.fa.gz38b771e3935adda2db635d8f34227262
SoybeanNONCODEv6_GMA.fa.gzec75c1b40c40fe520c86361a3f5322b3
G. raimondiiNONCODEv6_GRA.fa.gz6681f8d8a9077673d3b4aecdaccd57d5
AppleNONCODEv6_MAL.fa.gzc03eb096cc55fb08c63d5a234ecbdae1
CassavaNONCODEv6_MES.fa.gz25639acfea930838106264ebde2eed98
M. truncatulaNONCODEv6_MTR.fa.gz73d7f0d98607e32a04cd73d0c34a75b8
BananaNONCODEv6_MAC.fa.gzecb28e75ca2d663a5eb140bfd47a98a4
O. rufipogonNONCODEv6_ORU.fa.gz57939cd894e4de1d68aa85ad38aa449d
O. sativaNONCODEv6_OSA.fa.gzdc1dc78025be549b7d05d926335d8be3
P. patensNONCODEv6_PPA.fa.gze0597ada0b3b278a2d5b72a89469da59
P. trichocarpaNONCODEv6_POP.fa.gzfa6923e167ca129b7dd393b129792aa1
TomatoNONCODEv6_SLY.fa.gze123ff3b1c0af350cac4442b17460b44
PotatoNONCODEv6_STU.fa.gzbf1ed9a86b755653fc7bcd4247203052
CacaoNONCODEv6_TCA.fa.gz4bc428a653fd9e26e82104791bb6628a
TrefoilNONCODEv6_TPR.fa.gz8db31c041e10e4d31fc40ce28c28f0a0
WheatNONCODEv6_TAE.fa.gz9fe60b752bd46989f4f2d8f4ba743a63
GrapeNONCODEv6_VVI.fa.gz388b9f6ac8af5d0bcbcbca97187e7ef2
MaizeNONCODEv6_ZMA.fa.gz234c8b3940319a42c821e734f6e98211

LncRNA and LncRNA Genes(Bed Format) of NONCODEv6

SpeciesDownload AddressMD5
HumanNONCODEv6_hg38.lncAndGene.bed.gz99de4e0d68a2dc79fad62bfb6c7e6678
MouseNONCODEv6_mm10.lncAndGene.bed.gz7764c60f557c2510093453025ce8b2d1
CowNONCODEv5_bosTau6.lncAndGene.bed.gzcd9302df59d2737c5ef49f7234519e6f
RatNONCODEv5_rn6.lncAndGene.bed.gz0cd94e0c2dd2f6f7baaf7fb81dba4eae
ChickenNONCODEv5_galGal4.lncAndGene.bed.gzd01593a6bf426d8679d8a7187eedefa5
C.ElegansNONCODEv5_ce10.lncAndGene.bed.gzadbec0a3036c0610bbaf08112769d6f2
D.MelanogasterNONCODEv5_dm6.lncAndGene.bed.gz5f84a8b049b6654aeecbbc9b793edde6
ZebrafishNONCODEv5_danRer10.lncAndGene.bed.gz30f9c09a378a4e6b7ed72399f0f8a362
A.ThalianaNONCODEv5_tair10.lncAndGene.bed.gz6a44671d7d404e917533c6aa956a041b
YeastNONCODEv5_sacCer3.lncAndGene.bed.gz9e15e9d9c8b1849f6061c2e4f32a866e
ChimpNONCODEv5_panTro4.lncAndGene.bed.gz4cc5c3b41f7c5995b77164a7d8de415e
GorillaNONCODEv5_gorGor3.lncAndGene.bed.gz107761da32e0e3ce81a84cc0703f7128
OrangutanNONCODEv5_ponAbe2.lncAndGene.bed.gz91127932a67d15ed478e5d291e86c993
RhesusNONCODEv5_rheMac3.lncAndGene.bed.gz765ac3d8f3826ff24cafda047c495aa0
OpossumNONCODEv5_monDom5.lncAndGene.bed.gza51ed9a7ba079700ed5840677eb1a370
PlatypusNONCODEv5_ornAna1.lncAndGene.bed.gze2dc4a20fe0f2a828e647aad764f640c
PigNONCODEv5_susScr3.lncAndGene.bed.gz2ea2e0d253818d64af60e5ebd75287de
A. thalianaATH.NONCODEv6.lnc.bed.gz1d217181e4d23144420730a797356a49
B. napusBNA.NONCODEv6.lnc.bed.gz63848a96f5bf08332ad6d3fb38ec18a2
B. rapaBRA.NONCODEv6.lnc.bed.gz7f644c3870c77bffe66f05e71c0a5a34
QuinoaCQU.NONCODEv6.lnc.bed.gzbbccf2ea9e9c45f9039dc36d3e595782
C. reinhardtiiCRE.NONCODEv6.lnc.bed.gzfb3524d66af24d452390fcdcb2d117fa
CucumberCSA.NONCODEv6.lnc.bed.gz4b17c7a0deec1dba79f2c346aed59405
SoybeanGMA.NONCODEv6.lnc.bed.gze0b88191aaeeac099fa4f0ff32daecbb
G. raimondiiGRA.NONCODEv6.lnc.bed.gzdcc14ab367dfcd891f72c3e8cb06a780
AppleMAL.NONCODEv6.lnc.bed.gz12f8fed495d5bb4b62cffa259c47b58c
CassavaMES.NONCODEv6.lnc.bed.gz2d5a09f54d5f005ca9d2e35e1540d2b2
M. truncatulaMTR.NONCODEv6.lnc.bed.gzc81a94924e83fb5398460a662ea66e23
BananaMAC.NONCODEv6.lnc.bed.gza7f679c86a063d797c5f092a86177013
O. rufipogonORU.NONCODEv6.lnc.bed.gz728a39d2a484fa775e5c41dcfd233f45
O. sativaOSA.NONCODEv6.lnc.bed.gz646d5d37756da379c0452d23a50b0ab5
P. patensPPA.NONCODEv6.lnc.bed.gz41656c1a7a814f2d5baba11533a1f17a
P. trichocarpaPOP.NONCODEv6.lnc.bed.gz5059e2a224380fc4c604a37c08424a9a
TomatoSLY.NONCODEv6.lnc.bed.gz31be6a7da28c00b7cb8d98e770892c5c
PotatoSTU.NONCODEv6.lnc.bed.gz3dd8b0a597a43b034dd0dd7709baa85e
CacaoTCA.NONCODEv6.lnc.bed.gzb965f2e67f82715c362a15fac22c66bb
TrefoilTPR.NONCODEv6.lnc.bed.gz0e5159e46351a650e9dfcafb5c642d03
WheatTAE.NONCODEv6.lnc.bed.gz31776e7e2f22f0b21b620dcd241b7b49
GrapeVVI.NONCODEv6.lnc.bed.gz7c3ca855171ce4c51c8bb09f58c3055d
MaizeZMA.NONCODEv6.lnc.bed.gz1f6e1b14a46355e2bbc2d2fad7a33082

Other tables for NONCODE

DataDownload AddressMD5
Novel LncRNA in human T cellsNovel_lncRNA_in_T_cells.gtf.gzfa06f1137328fff152a49c0352f34b7c
gtf file of human lncRNANONCODEv6_human_hg38_lncRNA.gtf.gzb77c248e6d0271b69bfb8163617a6302

This following links provide all the ncRNA data (in fasta format) in earlier versions of NONCODE.


ncRNA in NONCODE v5.0
zip file (windows version): ncrna_NONCODE[v5.0].fasta.zip ab80607f5ca69240525328a9105651cd
zip file (linux version): ncrna_NONCODE[v5.0].fasta.tar.gz 5a56f86094491fbb49e7c5db415c0893
ncRNA in NONCODE 2016
zip file (windows version): ncrna_NONCODE2016.fasta.zip 3b7e310122e76758de42482dbc7969a5
zip file (linux version): ncrna_NONCODE2016.fasta.tar.gz cbd1d1ed4b6116f592760e4ecfec7a36
ncRNA in NONCODE v4.0
zip file (windows version): ncrna_NONCODE[v4.0].fasta.zip ecf9c3e12bb6ed856ba0477a13b68463
zip file (linux version): ncrna_NONCODE[v4.0].fasta.tar.gz 46c8a992c9a7d1cee3473a89f475f20a
ncRNA in NONCODE v3.0
zip file (windows version): ncrna_NONCODE[v3.0].fasta.zip 6853946c150a38a3b62a7f81bc75f42e
zip file (linux version): ncrna_NONCODE[v3.0].fasta.tar.gz 4c2da91a262087bb0ef34e40fae2d430
ncRNA in NONCODE v2.0
zip file (windows version):ncrna_NONCODE[v2.0].fasta.zip aba3aa00aa3c4b3eb39b105717e7cc69
zip file (linux version):ncrna_NONCODE[v2.0].fasta.tar.gz 87129711c942a012f7dc87831049ee14
ncRNA in NONCODE v1.0
zip file (windows version):ncrna_NONCODE[v1.0].fasta.zip e1c5fb76ddf0b02835041a23169cc263
zip file (linux version): ncrna_NONCODE[v1.0].fasta.tar.gz 8002f0b1cd16c12fc5127e484057bde1